Next: OutputAlignments, Previous: Exporting, Up: Exporting [Contents]
The Output
filter writes all blocks to a MAF file.
maf.filter= \ [...], Output( \ file=data.filtered.maf.gz, \ compression=gzip, \ mask=yes), \ [...] |
file={none|{path}}
A file path where to write alignment blocks, in the MAF format.
compression={none|gzip|zip|bzip2}
Compression format for output file.
mask={yes|no}
Tell if sequences should be masked (if a mask annotation is available), or if masking information should be ignored.